root/test-data/1.fastqsolexa

Revision 1340:1c3b45fb0562, 418 bytes (checked in by Greg Von Kuster <greg@bx.psu.edu>, 7 months ago)

Requires config modification - Add Fastq sniffer, add support for fastqsolexa data type, rename convert_fatsq2fasta tool to be fastq_to_fasta_qual, add functional tests for both fastq and fastqsolexa data types, misc code cleanup.

Line 
1 @HANNIBAL_1_FC302VTAAXX:2:1:228:167
2 GAATTGATCAGGACATAGGACAACTGTAGGCACCAT
3 +HANNIBAL_1_FC302VTAAXX:2:1:228:167
4 40 40 40 40 35 40 40 40 25 40 40 26 40 9 33 11 40 35 17 40 40 33 40 7 9 15 3 22 15 30 11 17 9 4 9 4
5 @HANNIBAL_1_FC302VTAAXX:2:1:156:340
6 GAGTTCTCGTCGCCTGTAGGCACCATCAATCGTATG
7 +HANNIBAL_1_FC302VTAAXX:2:1:156:340
8 40 15 40 17 6 36 40 40 40 25 40 9 35 33 40 14 14 18 15 17 19 28 31 4 24 18 27 14 15 18 2 8 12 8 11 9
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