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Changeset 0:ae898a17920b

Timestamp:

11/15/06 11:28:21 (2 years ago)

Author:

James Taylor <james@bx.psu.edu>

branch:

default

convert_revision:

svn:9bcadc22-80f8-0310-8a53-c8f022958886/galaxy/trunk@1222

Message:

Moving james-wsgi branch to new trunk.

Files:

LICENSE.txt (added)
MANIFEST.in (added)
Makefile (added)
README.txt (added)
arch/cygwin_nt-5.1-i686/lib/python/_namemapper.dll (added)
arch/darwin-powerpc/bin/galaxyOps3 (added)
arch/darwin-powerpc/lib/python/_namemapper.so (added)
arch/linux-i686/bin/basicStats2 (added)
arch/linux-i686/bin/galaxyOps (added)
arch/linux-i686/bin/galaxyOps2 (added)
arch/linux-i686/bin/galaxyOps3 (added)
arch/linux-i686/lib/python/_namemapper.so (added)
arch/linux-x86_64/lib/python/_namemapper.so (added)
arch/win32/lib/python/_namemapper.pyd (added)
buildbot_functional_tests.sh (added)
cron/README.txt (added)
cron/add_manual_builds.py (added)
cron/build_chrom_db.py (added)
cron/parse_builds.py (added)
cron/parse_builds_3_sites.py (added)
cron/updateucsc.sh.sample (added)
database/files/info.txt (added)
database/import/info.txt (added)
database/info.txt (added)
galaxy/__init__.py (added)
galaxy/app.py (added)
galaxy/config.py (added)
galaxy/datatypes/__init__.py (added)
galaxy/datatypes/data.py (added)
galaxy/datatypes/images.py (added)
galaxy/datatypes/interval.py (added)
galaxy/datatypes/sequence.py (added)
galaxy/datatypes/sniff.py (added)
galaxy/datatypes/test/alignment.axt (added)
galaxy/datatypes/test/alignment.lav (added)
galaxy/datatypes/test/interval.bed (added)
galaxy/datatypes/test/sequence.fasta (added)
galaxy/datatypes/test/sequence.maf (added)
galaxy/datatypes/test/test.gff (added)
galaxy/datatypes/test/test_space.bed (added)
galaxy/datatypes/test/test_tab.bed (added)
galaxy/datatypes/test/wiggle.wig (added)
galaxy/db.py (added)
galaxy/form_builder.py (added)
galaxy/heartbeat.py (added)
galaxy/interfaces/__init__.py (added)
galaxy/interfaces/admin.py (added)
galaxy/interfaces/async.py (added)
galaxy/interfaces/common.py (added)
galaxy/interfaces/error.py (added)
galaxy/interfaces/proxy.py (added)
galaxy/interfaces/root.py (added)
galaxy/interfaces/tool_runner.py (added)
galaxy/interfaces/user.py (added)
galaxy/jobs.py (added)
galaxy/model/__init__.py (added)
galaxy/model/mapping.py (added)
galaxy/model/mapping_tests.py (added)
galaxy/test/__init__.py (added)
galaxy/test/base/__init__.py (added)
galaxy/test/base/twilltestcase.py (added)
galaxy/test/functional/__init__.py (added)
galaxy/test/functional/test_3A_GetData.py (added)
galaxy/test/functional/test_3B_GetEncodeData.py (added)
galaxy/test/functional/test_basic.py (added)
galaxy/test/functional/test_datasource_tools.py (added)
galaxy/test/functional/test_history.py (added)
galaxy/test/functional/test_operations.py (added)
galaxy/test/functional/test_toolbox.py (added)
galaxy/tools/__init__.py (added)
galaxy/tools/actions/__init__.py (added)
galaxy/tools/actions/upload.py (added)
galaxy/tools/parameters.py (added)
galaxy/tools/test.py (added)
galaxy/tools/validation.py (added)
galaxy/util.py (added)
galaxy/web/__init__.py (added)
galaxy/web/framework.py (added)
galaxy/web/middleware.py (added)
galaxy/web/server.py (added)
galaxy/web/static.py (added)
modules/cookbook/__init__.py (added)
modules/cookbook/doc_optparse.py (added)
modules/cookbook/odict.py (added)
modules/cookbook/path.py (added)
modules/cookbook/patterns.py (added)
modules/coverage.py (added)
modules/docutils/__init__.py (added)
modules/docutils/core.py (added)
modules/docutils/examples.py (added)
modules/docutils/frontend.py (added)
modules/docutils/io.py (added)
modules/docutils/languages/__init__.py (added)
modules/docutils/languages/af.py (added)
modules/docutils/languages/ca.py (added)
modules/docutils/languages/cs.py (added)
modules/docutils/languages/de.py (added)
modules/docutils/languages/en.py (added)
modules/docutils/languages/eo.py (added)
modules/docutils/languages/es.py (added)
modules/docutils/languages/fi.py (added)
modules/docutils/languages/fr.py (added)
modules/docutils/languages/it.py (added)
modules/docutils/languages/nl.py (added)
modules/docutils/languages/pt_br.py (added)
modules/docutils/languages/ru.py (added)
modules/docutils/languages/sk.py (added)
modules/docutils/languages/sv.py (added)
modules/docutils/languages/zh_tw.py (added)
modules/docutils/nodes.py (added)
modules/docutils/parsers/__init__.py (added)
modules/docutils/parsers/rst/__init__.py (added)
modules/docutils/parsers/rst/directives/__init__.py (added)
modules/docutils/parsers/rst/directives/admonitions.py (added)
modules/docutils/parsers/rst/directives/body.py (added)
modules/docutils/parsers/rst/directives/html.py (added)
modules/docutils/parsers/rst/directives/images.py (added)
modules/docutils/parsers/rst/directives/misc.py (added)
modules/docutils/parsers/rst/directives/parts.py (added)
modules/docutils/parsers/rst/directives/references.py (added)
modules/docutils/parsers/rst/directives/tables.py (added)
modules/docutils/parsers/rst/languages/__init__.py (added)
modules/docutils/parsers/rst/languages/af.py (added)
modules/docutils/parsers/rst/languages/ca.py (added)
modules/docutils/parsers/rst/languages/cs.py (added)
modules/docutils/parsers/rst/languages/de.py (added)
modules/docutils/parsers/rst/languages/en.py (added)
modules/docutils/parsers/rst/languages/eo.py (added)
modules/docutils/parsers/rst/languages/es.py (added)
modules/docutils/parsers/rst/languages/fi.py (added)
modules/docutils/parsers/rst/languages/fr.py (added)
modules/docutils/parsers/rst/languages/it.py (added)
modules/docutils/parsers/rst/languages/nl.py (added)
modules/docutils/parsers/rst/languages/pt_br.py (added)
modules/docutils/parsers/rst/languages/ru.py (added)
modules/docutils/parsers/rst/languages/sk.py (added)
modules/docutils/parsers/rst/languages/sv.py (added)
modules/docutils/parsers/rst/languages/zh_tw.py (added)
modules/docutils/parsers/rst/roles.py (added)
modules/docutils/parsers/rst/roman.py (added)
modules/docutils/parsers/rst/states.py (added)
modules/docutils/parsers/rst/tableparser.py (added)
modules/docutils/readers/__init__.py (added)
modules/docutils/readers/pep.py (added)
modules/docutils/readers/python/__init__.py (added)
modules/docutils/readers/python/moduleparser.py (added)
modules/docutils/readers/python/pynodes.py (added)
modules/docutils/readers/standalone.py (added)
modules/docutils/statemachine.py (added)
modules/docutils/transforms/__init__.py (added)
modules/docutils/transforms/components.py (added)
modules/docutils/transforms/frontmatter.py (added)
modules/docutils/transforms/misc.py (added)
modules/docutils/transforms/parts.py (added)
modules/docutils/transforms/peps.py (added)
modules/docutils/transforms/references.py (added)
modules/docutils/transforms/universal.py (added)
modules/docutils/urischemes.py (added)
modules/docutils/utils.py (added)
modules/docutils/writers/__init__.py (added)
modules/docutils/writers/docutils_xml.py (added)
modules/docutils/writers/html4css1.py (added)
modules/docutils/writers/htmlfrag.py (added)
modules/docutils/writers/latex2e.py (added)
modules/docutils/writers/newlatex2e.py (added)
modules/docutils/writers/null.py (added)
modules/docutils/writers/pep_html.py (added)
modules/docutils/writers/pseudoxml.py (added)
modules/elementtree/ElementInclude.py (added)
modules/elementtree/ElementPath.py (added)
modules/elementtree/ElementTree.py (added)
modules/elementtree/HTMLTreeBuilder.py (added)
modules/elementtree/SgmlopXMLTreeBuilder.py (added)
modules/elementtree/SimpleXMLTreeBuilder.py (added)
modules/elementtree/SimpleXMLWriter.py (added)
modules/elementtree/TidyHTMLTreeBuilder.py (added)
modules/elementtree/TidyTools.py (added)
modules/elementtree/XMLTreeBuilder.py (added)
modules/elementtree/__init__.py (added)
modules/ez_setup.py (added)
modules/fpconst.py (added)
modules/misc.py (added)
modules/pkg_resources.py (added)
modules/psyco_full.py (added)
modules/rst2html.py (added)
nosetests.py (added)
nosetests.sh (added)
paster.py (added)
run.sh (added)
run_functional_tests.sh (added)
run_unit_tests.sh (added)
setup.py (added)
static/about.html (added)
static/about.rst (added)
static/dojo.js (added)
static/favicon.ico (added)
static/galaxyIndex.html (added)
static/galaxyIndex.rst (added)
static/gmaj/docs/cathy.gmaj.png (added)
static/gmaj/docs/gmaj.css (added)
static/gmaj/docs/gmaj_bugs.html (added)
static/gmaj/docs/gmaj_help.html (added)
static/gmaj/docs/gmaj_input.html (added)
static/gmaj/docs/gmaj_install.html (added)
static/gmaj/docs/gmaj_news.html (added)
static/gmaj/docs/gmaj_readme.html (added)
static/gmaj/docs/hand14.gif (added)
static/gmaj/docs/sample.gmaj (added)
static/gmaj/gmaj.jar (added)
static/help.css (added)
static/help.html (added)
static/help.rst (added)
static/images/SetAttr.png (added)
static/images/SetGenome.png (added)
static/images/bed_warn.png (added)
static/images/delete_icon.png (added)
static/images/delete_icon_dark.png (added)
static/images/dw.gif (added)
static/images/eye_icon.png (added)
static/images/eye_icon_dark.png (added)
static/images/galaxy.png (added)
static/images/gsummary_out.gif (added)
static/images/gsummary_out_groups.gif (added)
static/images/hatch-023858.png (added)
static/images/hatch-fade-023858.gif (added)
static/images/histogram.png (added)
static/images/histogram2.png (added)
static/images/history.gif (added)
static/images/history_down_arrow.gif (added)
static/images/history_up_arrow.gif (added)
static/images/icon_error_lrg.gif (added)
static/images/icon_error_sml.gif (added)
static/images/icon_info_lrg.gif (added)
static/images/icon_info_sml.gif (added)
static/images/icon_success_lrg.gif (added)
static/images/icon_success_sml.gif (added)
static/images/icon_warning_lrg.gif (added)
static/images/icon_warning_sml.gif (added)
static/images/kendall.png (added)
static/images/lock.jpg (added)
static/images/pearson.png (added)
static/images/pencil_icon.png (added)
static/images/pencil_icon_dark.png (added)
static/images/scatter.png (added)
static/images/scatterplot.png (added)
static/images/screencast.png (added)
static/images/spearman.png (added)
static/images/square_empty.gif (added)
static/images/square_error.gif (added)
static/images/square_ok.gif (added)
static/images/square_queued.gif (added)
static/images/square_running.gif (added)
static/images/thumbtack_icon.png (added)
static/images/thumbtack_icon_dark.png (added)
static/images/tool_menu_down_arrow.gif (added)
static/images/tools.gif (added)
static/images/toolsExpandingMenu.gif (added)
static/images/up.gif (added)
static/index_frame_history.html (added)
static/index_frame_stacked.html (added)
static/index_frame_three_col.html (added)
static/index_frame_tools.html (added)
static/index_jt.css (added)
static/laj/docs/java_plugin_help.html (added)
static/laj/docs/laj_applet_help.html (added)
static/laj/laj.jar (added)
static/light_hatched_style/Makefile (added)
static/light_hatched_style/base.css.tmpl (added)
static/light_hatched_style/blue/base.css (added)
static/light_hatched_style/blue/base_bg.png (added)
static/light_hatched_style/blue/data_error.png (added)
static/light_hatched_style/blue/data_ok.png (added)
static/light_hatched_style/blue/data_queued.png (added)
static/light_hatched_style/blue/data_running.gif (added)
static/light_hatched_style/blue/done_message_icon.png (added)
static/light_hatched_style/blue/error_bg.png (added)
static/light_hatched_style/blue/error_large.png (added)
static/light_hatched_style/blue/error_message_icon.png (added)
static/light_hatched_style/blue/error_small.png (added)
static/light_hatched_style/blue/footer_title_bg.png (added)
static/light_hatched_style/blue/form_title_bg.png (added)
static/light_hatched_style/blue/gray_bg.png (added)
static/light_hatched_style/blue/history.css (added)
static/light_hatched_style/blue/info_large.png (added)
static/light_hatched_style/blue/info_message_icon.png (added)
static/light_hatched_style/blue/info_small.png (added)
static/light_hatched_style/blue/masthead.css (added)
static/light_hatched_style/blue/masthead_bg.png (added)
static/light_hatched_style/blue/menu_bg.png (added)
static/light_hatched_style/blue/ok_bg.png (added)
static/light_hatched_style/blue/ok_large.png (added)
static/light_hatched_style/blue/ok_small.png (added)
static/light_hatched_style/blue/tool_menu.css (added)
static/light_hatched_style/blue/wait_large.png (added)
static/light_hatched_style/blue/wait_small.png (added)
static/light_hatched_style/blue/warn_bg.png (added)
static/light_hatched_style/blue/warn_large.png (added)
static/light_hatched_style/blue/warn_message_icon.png (added)
static/light_hatched_style/blue/warn_small.png (added)
static/light_hatched_style/blue_colors.ini (added)
static/light_hatched_style/galaxy_icons.svg (added)
static/light_hatched_style/galaxy_spinner.fla (added)
static/light_hatched_style/gradient.py (added)
static/light_hatched_style/green/base.css (added)
static/light_hatched_style/green/base_bg.png (added)
static/light_hatched_style/green/error_bg.png (added)
static/light_hatched_style/green/footer_title_bg.png (added)
static/light_hatched_style/green/form_title_bg.png (added)
static/light_hatched_style/green/gray_bg.png (added)
static/light_hatched_style/green/history.css (added)
static/light_hatched_style/green/masthead.css (added)
static/light_hatched_style/green/masthead_bg.png (added)
static/light_hatched_style/green/menu_bg.png (added)
static/light_hatched_style/green/ok_bg.png (added)
static/light_hatched_style/green/tool_menu.css (added)
static/light_hatched_style/green/warn_bg.png (added)
static/light_hatched_style/green_colors.ini (added)
static/light_hatched_style/history.css.tmpl (added)
static/light_hatched_style/make_style.py (added)
static/light_hatched_style/masthead.css.tmpl (added)
static/light_hatched_style/png_over_color.py (added)
static/light_hatched_style/shared_images/data_error.png (added)
static/light_hatched_style/shared_images/data_ok.png (added)
static/light_hatched_style/shared_images/data_queued.png (added)
static/light_hatched_style/shared_images/data_running.gif (added)
static/light_hatched_style/shared_images/error_large.png (added)
static/light_hatched_style/shared_images/error_small.png (added)
static/light_hatched_style/shared_images/info_large.png (added)
static/light_hatched_style/shared_images/info_small.png (added)
static/light_hatched_style/shared_images/ok_large.png (added)
static/light_hatched_style/shared_images/ok_small.png (added)
static/light_hatched_style/shared_images/wait_large.png (added)
static/light_hatched_style/shared_images/wait_small.png (added)
static/light_hatched_style/shared_images/warn_large.png (added)
static/light_hatched_style/shared_images/warn_small.png (added)
static/light_hatched_style/tool_menu.css.tmpl (added)
static/old_blue_style/base.css (added)
static/old_blue_style/history.css (added)
static/old_blue_style/masthead.css (added)
static/old_blue_style/tool_form.css (added)
static/operation_icons/cluster.png (added)
static/operation_icons/clusterMerge.png (added)
static/operation_icons/complement.png (added)
static/operation_icons/difference.png (added)
static/operation_icons/gops_cluster.gif (added)
static/operation_icons/gops_complement.gif (added)
static/operation_icons/gops_concatenate.gif (added)
static/operation_icons/gops_intersect.gif (added)
static/operation_icons/gops_merge.gif (added)
static/operation_icons/gops_subtract.gif (added)
static/operation_icons/intersect.png (added)
static/operation_icons/merge.png (added)
static/operation_icons/overlap.png (added)
static/operation_icons/proximityEx.png (added)
static/operation_icons/proximityInc.png (added)
static/operation_icons/subtract.png (added)
static/operation_icons/union.png (added)
static/operation_icons/vicinityEnd.png (added)
static/operation_icons/vicinityStart.png (added)
static/scripts/builder.js (added)
static/scripts/controls.js (added)
static/scripts/dragdrop.js (added)
static/scripts/effects.js (added)
static/scripts/ie_pngfix.js (added)
static/scripts/prototype.js (added)
static/scripts/scriptaculous.js (added)
static/scripts/slider.js (added)
static/scripts/unittest.js (added)
static/toolbox.js (added)
static/ucsc/builds.txt (added)
static/ucsc/manual_builds.txt (added)
static/ucsc/ucsc_build_sites.txt (added)
static/universe.css (added)
static/universe.js (added)
static/welcome.html (added)
static/welcome.rst (added)
static/wipe.js (added)
templates/admin_main.tmpl (added)
templates/application_error.tmpl (added)
templates/edit.tmpl (added)
templates/edit_complete.tmpl (added)
templates/form.tmpl (added)
templates/history.tmpl (added)
templates/history.xml (added)
templates/history_available.tmpl (added)
templates/history_ids.xml (added)
templates/history_import.tmpl (added)
templates/history_rename.tmpl (added)
templates/history_share.tmpl (added)
templates/history_store.tmpl (added)
templates/history_switch.tmpl (added)
templates/index_frames.tmpl (added)
templates/masthead.tmpl (added)
templates/message.tmpl (added)
templates/share.tmpl (added)
templates/tool_executed.tmpl (added)
templates/tool_form.tmpl (added)
templates/tool_menu.tmpl (added)
templates/user_account.tmpl (added)
templates/user_main.tmpl (added)
test-data/1.axt (added)
test-data/1.bed (added)
test-data/2.bed (added)
test-data/3.bed (added)
test-data/3.maf (added)
test-data/3A_GetData_ucsc_bed_range.dat (added)
test-data/4.bed (added)
test-data/4.maf (added)
test-data/5.gff (added)
test-data/MyData.bed (added)
test-data/axt_to_concat_fasta.dat (added)
test-data/axt_to_fasta.dat (added)
test-data/cc.EarlyRepSeg.20051216.bed (added)
test-data/cf-bed2gff.dat (added)
test-data/cf-gene2exon.dat (added)
test-data/cf-gff2bed.dat (added)
test-data/cf_maf2fasta.dat (added)
test-data/cf_maf2fasta_concat.dat (added)
test-data/eq-addvalue.dat (added)
test-data/eq-cat.dat (added)
test-data/eq-combine.dat (added)
test-data/eq-compute.dat (added)
test-data/eq-condense.dat (added)
test-data/eq-convert.dat (added)
test-data/eq-createinterval.dat (added)
test-data/eq-cut.dat (added)
test-data/eq-paste.dat (added)
test-data/eq-removebeginning.dat (added)
test-data/eq-showbeginning.dat (added)
test-data/eq-showtail.dat (added)
test-data/fs-compare.dat (added)
test-data/fs-filter.dat (added)
test-data/fs-grep.dat (added)
test-data/fs-joiner.dat (added)
test-data/fs-sort.dat (added)
test-data/fsa-extract_blastz_alignments.dat (added)
test-data/fsa_extract_blastz_alignments.dat (added)
test-data/fsa_extract_genomic_dna.dat (added)
test-data/fsa_interval2maf.dat (added)
test-data/ggs_aggregate_datapoints.dat (added)
test-data/ggs_wiggle2simple.dat (added)
test-data/gops-basecoverage.dat (added)
test-data/gops-cluster-1.dat (added)
test-data/gops-cluster-2.dat (added)
test-data/gops-cluster-3.dat (added)
test-data/gops-complement.dat (added)
test-data/gops-concat.dat (added)
test-data/gops-coverage.dat (added)
test-data/gops-intersect-p.dat (added)
test-data/gops-intersect.dat (added)
test-data/gops-join-both.dat (added)
test-data/gops-join-left.dat (added)
test-data/gops-join-none.dat (added)
test-data/gops-join-right.dat (added)
test-data/gops-merge.dat (added)
test-data/gops-subtract-p.dat (added)
test-data/gops-subtract.dat (added)
test-data/op-cluster.dat (added)
test-data/op-clustermerge.dat (added)
test-data/op-complement.dat (added)
test-data/op-compute.dat (added)
test-data/op-covdensity.dat (added)
test-data/op-difference.dat (added)
test-data/op-extend.dat (added)
test-data/op-intersect.dat (added)
test-data/op-interval-complement.dat (added)
test-data/op-interval-covdensity.dat (added)
test-data/op-join.dat (added)
test-data/op-merge.dat (added)
test-data/op-overlap.dat (added)
test-data/op-porximity (added)
test-data/op-proximity.dat (added)
test-data/op-subtract.dat (added)
test-data/op-union.dat (added)
test-data/plot_histogram.pdf (added)
test-data/plot_scatter.pdf (added)
test-data/sta_correlation.dat (added)
test-data/sta_count.dat (added)
test-data/sta_summary.dat (added)
test-data/temp_cf-bed2gff.dat (added)
test-data/ucsc_proxy_encode.dat (added)
test-data/ucsc_proxy_range.dat (added)
test.conf.sample (added)
tool_conf.xml.sample (added)
tools/data_source/bed_convert.xml (added)
tools/data_source/biomart.xml (added)
tools/data_source/biomart_filter.py (added)
tools/data_source/echo.py (added)
tools/data_source/echo.xml (added)
tools/data_source/encode_db.xml (added)
tools/data_source/encode_import.py (added)
tools/data_source/encode_import_all_latest_datasets.xml (added)
tools/data_source/encode_import_chromatin_and_chromosomes.xml (added)
tools/data_source/encode_import_code.py (added)
tools/data_source/encode_import_gencode.xml (added)
tools/data_source/encode_import_genes_and_transcripts.xml (added)
tools/data_source/encode_import_multi-species_sequence_analysis.xml (added)
tools/data_source/encode_import_transcription_regulation.xml (added)
tools/data_source/encodedb_filter.py (added)
tools/data_source/fetch.py (added)
tools/data_source/genbank.py (added)
tools/data_source/genbank.xml (added)
tools/data_source/import.py (added)
tools/data_source/import.xml (added)
tools/data_source/microbial_import.py (added)
tools/data_source/microbial_import.xml (added)
tools/data_source/microbial_import_code.py (added)
tools/data_source/ucsc_archaea.xml (added)
tools/data_source/ucsc_filter.py (added)
tools/data_source/ucsc_proxy.py (added)
tools/data_source/ucsc_proxy.xml (added)
tools/data_source/ucsc_testproxy.xml (added)
tools/data_source/upload.xml (added)
tools/data_source/upload_code.py (added)
tools/emboss/emboss_antigenic.xml (added)
tools/emboss/emboss_backtranseq.xml (added)
tools/emboss/emboss_banana.pl (added)
tools/emboss/emboss_banana.xml (added)
tools/emboss/emboss_biosed.xml (added)
tools/emboss/emboss_btwisted.xml (added)
tools/emboss/emboss_cai.xml (added)
tools/emboss/emboss_cai_custom.xml (added)
tools/emboss/emboss_chaos.xml (added)
tools/emboss/emboss_charge.xml (added)
tools/emboss/emboss_checktrans.xml (added)
tools/emboss/emboss_chips.xml (added)
tools/emboss/emboss_cirdna.xml (added)
tools/emboss/emboss_codcmp.xml (added)
tools/emboss/emboss_coderet.xml (added)
tools/emboss/emboss_compseq.xml (added)
tools/emboss/emboss_cpgplot.xml (added)
tools/emboss/emboss_cpgplot_wrapper.pl (added)
tools/emboss/emboss_cpgreport.xml (added)
tools/emboss/emboss_cusp.xml (added)
tools/emboss/emboss_cutseq.xml (added)
tools/emboss/emboss_dan.xml (added)
tools/emboss/emboss_degapseq.xml (added)
tools/emboss/emboss_descseq.xml (added)
tools/emboss/emboss_diffseq.xml (added)
tools/emboss/emboss_digest.xml (added)
tools/emboss/emboss_dotmatcher.xml (added)
tools/emboss/emboss_dotpath.xml (added)
tools/emboss/emboss_dottup.xml (added)
tools/emboss/emboss_dreg.xml (added)
tools/emboss/emboss_einverted.xml (added)
tools/emboss/emboss_epestfind.xml (added)
tools/emboss/emboss_eprimer3.xml (added)
tools/emboss/emboss_equicktandem.xml (added)
tools/emboss/emboss_est2genome.xml (added)
tools/emboss/emboss_etandem.xml (added)
tools/emboss/emboss_extractfeat.xml (added)
tools/emboss/emboss_e