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Timestamp:
04/11/08 16:11:21 (9 months ago)
Author:
Nate Coraor <nate@bx.psu.edu>
branch:
default
convert_revision:
svn:9bcadc22-80f8-0310-8a53-c8f022958886/galaxy/trunk@2533
Message:

Separate framework and tool environments.

Whether running locally or via PBS, $PATH should now be handled in your
user's environment.

This also fixes problems like PYTHONPATH on the new blast nodes being
wrong (because they are x86_64 and the frontends are i686).

Note that you can actually start Galaxy without having an eggs dir now.

Files:

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  • run.sh

    r1125 r1172  
    11#!/bin/sh 
    22 
    3 . ./scripts/get_python.sh 
    4 . ./setup_paths.sh 
    5  
    6 # Create directories 
    7 CREATE_DIRS=" 
    8 $UNIVERSE_HOME/database/$CREATE_DIR/files 
    9 $UNIVERSE_HOME/database/$CREATE_DIR/tmp 
    10 " 
    11  
    12 for CREATE_DIR in $CREATE_DIRS; do 
    13     if [ ! -d $CREATE_DIR -o ! -h $CREATE_DIR ]; then 
    14         mkdir -p $CREATE_DIR 
    15     fi 
    16 done 
    17  
    18 $GALAXY_PYTHON ./scripts/paster.py serve universe_wsgi.ini $@ 
     3cd `dirname $0` 
     4python -ES ./scripts/paster.py serve universe_wsgi.ini $@