Changeset 1611:c7bc4de93fbb
- Timestamp:
- 11/06/08 09:44:19
(2 months ago)
- Author:
- Greg Von Kuster <greg@bx.psu.edu>
- branch:
- default
- Message:
Create a job_to_output_dataset for the upload tool job.
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Files:
-
Legend:
- Unmodified
- Added
- Removed
- Modified
- Copied
- Moved
| r1605 |
r1611 |
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| 94 | 94 | file_size_str = datatypes.data.nice_size( hda.dataset.file_size ) |
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| 95 | 95 | job.info = "%s, size: %s" % ( hda.info, file_size_str ) |
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| | 96 | job.add_output_dataset( hda.name, hda ) |
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| 96 | 97 | job.flush() |
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| 97 | 98 | log.info( 'job id %d ended ok, file size: %s' % ( job.id, file_size_str ) ) |
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| … | … | |
| 113 | 114 | trans.history.add_dataset( data ) |
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| 114 | 115 | trans.app.model.flush() |
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| 115 | | # Indicate job failure by setting state and message |
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| | 116 | # Indicate job failure by setting state and info |
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| 116 | 117 | job.state = trans.app.model.Job.states.ERROR |
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| 117 | 118 | job.info = err_msg |
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| 118 | | # If the failure is due to a Galaxy framework exception, save the traceback |
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| | 119 | job.add_output_dataset( data.name, data ) |
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| 119 | 120 | job.flush() |
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| 120 | 121 | log.info( 'job id %d ended with errors' % job.id ) |
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Galaxy